GenBank Feature Handling

Sequencher imports GenBank Features in your files (if present) and has a variety of tools to help you manage, add, or edit Features. You can import Genbank Feature keys, or designate a key for your own features. The Define Feature Key Default Style user preference lets you set up your own colors and Feature annotations, so you could distinguish introns from exons, and variants from sequencing errors for example

Sequence Trimming

Automated DNA sequencers occasionally produce poor quality reads, particularly near the sequencing primer site, and toward the end of longer sequence runs. The sequences of clones from DNA libraries frequently contain vector sequence, polyA tails, or other unrelated sequence. Introns and primer sequence frequently flank the sequence of amplified exons. Unless removed by trimming, any of these artifacts will distort your sequence assembly and downstream sequence analysis.

Apply Sequencher's versatile assembly tools to
  • Compare gene variants to a reference sequence
  • Confirm vector constructs
  • Assemble viral and bacterial genomes

 

 

 

 

 

 

 

 

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